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Biomedical Mathematics Group

Biomedical Mathematics Group

기초과학연구원 의생명수학그룹

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  • July 2024

  • Wed 31
    July 31, 2024 @ 4:00 pm - 5:00 pm KST

    Hyukpyo Hong, Koopman representation: Linear representation – not an approximation – of nonlinear dynamics

    Abstract: A system of ordinary differential equations (ODEs) is one of the most widely used tools to describe a deterministic dynamical system. In general, such ODEs involve nonlinear equations, which make analysis of dynamical systems difficult. In this talk, we introduce Koopman theory, which offers a linear representation – not an approximation – of nonlinear dynamics. In particular, we present a data-driven algorithm to find such a linear representation

  • August 2024

  • Fri 2
    August 2, 2024 @ 2:00 pm - 4:00 pm KST

    Yun Min Song, RNA velocity of single cells

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "RNA velocity of single sells" by Gioele La Manno et.al., Nature, 2018. Abstract RNA abundance is a powerful indicator of the state of …

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  • Wed 7
    August 7, 2024 @ 4:00 pm - 5:00 pm KST

    Uncovering personalized glucose responses and circadian rhythms from multiple wearable biosensors with Bayesian dynamical modeling

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract: Wearable biosensors measure physiological variables with high temporal resolution over multiple days and are increasingly employed in clinical settings, such as continuous glucose monitoring in diabetes care. Such datasets …

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  • Fri 9
    August 9, 2024 @ 2:00 pm - 4:00 pm KST

    Gyuyoung Hwang, A universal description of stochastic oscillators

    In this talk, we discuss the paper "A universal description of stochastic oscillators", by Alberto Perez-Cervera et. al., PNAS, 2023. Abstract  Many systems in physics, chemistry, and biology exhibit oscillations …

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  • Fri 16
    August 16, 2024 @ 2:00 pm - 4:00 pm KST

    Kevin Spinicci, SMSSVD : Submatrix selection singular value decomposition

    In this talk, we discuss the paper, "SMSSVD : Submatrix selection singular value decomposition", by Rasmus Henningsson and Magnus Fontes, Bioinformatics, 2019. Abstract Motivation High throughput biomedical measurements normally capture …

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  • September 2024

  • Wed 4
    September 4, 2024 @ 4:00 pm - 5:00 pm KST

    Quantitative Ecology of Host-associated Microbiomes – Lei Dai

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract: The realization that microbiomes, associated with virtually all multicellular organisms, have tremendous impact on their host health is considered as one of the most important scientific discoveries in the …

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  • Thu 5
    September 5, 2024 @ 10:00 am - 11:00 am KST

    Make Your Science Friendly: A Guide to Engaging Visuals – Sunghwan Bae

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    The talk will be hybrid, participants may join via Zoom with the following link: https://us06web.zoom.us/j/99567630778?pwd=N2ZrUWtqZzJ0YURVTzlZT3JJR3FUQT09

  • Fri 6
    September 6, 2024 @ 2:00 pm - 4:00 pm KST

    Olive Cawiding, Predicting multiple observations in complex systems through low-dimensional embeddings

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper, "Predicting multiple observations in complex systems through low-dimensional embeddings", by Tao Wu et. al., Nature Communications, 2024. Zoom : https://us06web.zoom.us/j/99567630778?pwd=N2ZrUWtqZzJ0YURVTzlZT3JJR3FUQT09 Abstract Forecasting all components …

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  • Fri 13
    September 13, 2024 @ 2:00 pm - 4:00 pm KST

    Hyun Kim, Deep learning linking mechanistic models to single-cell transcriptomics data reveals transcriptional bursting in response to DNA damage

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Deep learning linking mechanistic models to single-cell transcriptomics data reveals transcriptional bursting in response to DNA damage" by Zhiwei Huang, et. al., bioRxiv, …

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  • Fri 20
    September 20, 2024 @ 2:00 pm - 4:00 pm KST

    Brenda Gavina, Achieving Occam’s razor: Deep learning for optimal model reduction

    In this talk, we discuss the paper "Achieving Occam’s razor: Deep learning for optimal model reduction" by Botond B. Antal et.al., PLOS Computational Biology, 2024. Abstract  All fields of science …

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  • October 2024

  • Wed 2
    October 2, 2024 @ 4:00 pm - 5:00 pm KST

    Novel approaches and technologies for the study of sleep and circadian rhythms in health and disease – Derk-Jan Dijk

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract: The study of sleep and circadian rhythms at scale requires novel technologies and approaches that are valid, cost effective and do not pose much of a burden to the …

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  • Fri 4
    October 4, 2024 @ 2:00 pm - 4:00 pm KST

    Dongju Lim, Mathematical model for the distribution of DNA replication origins

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk we discuss the paper "Mathematical model for the distribution of DNA replication origins" by Alessandro de Moura and Jens Karschau, Physical Review E, 2024. Abstract  DNAreplication in yeast and in …

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IBS 의생명수학그룹 Biomedical Mathematics Group
기초과학연구원 수리및계산과학연구단 의생명수학그룹
대전 유성구 엑스포로 55 (우) 34126
IBS Biomedical Mathematics Group (BIMAG)
Institute for Basic Science (IBS)
55 Expo-ro Yuseong-gu Daejeon 34126 South Korea
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