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Biomedical Mathematics Group

Biomedical Mathematics Group

기초과학연구원 의생명수학그룹

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12 events found.

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  • May 2024

  • Fri 17
    May 17, 2024 @ 2:00 pm - 4:00 pm KST

    Gyuyoung Hwang, Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    We will discuss about “Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming”, Cell (2019).   Abstract Understanding the molecular programs that guide differentiation during development is a …

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  • Fri 24
    May 24, 2024 @ 2:00 pm - 4:00 pm KST

    Kévin SPINICCI, PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

    We will discuss about “PenDA, a rank-based method for personalized differential analysis: Application to lung cancer” Plos Computational Biology (2020). Abstract The hopes of precision medicine rely on our capacity …

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  • Mon 27
    May 27, 2024 @ 4:00 pm - 5:00 pm KST

    Timothy L. Downing, Biophysical Regulation of Cell Fate, from ECM to Nuclear Chromatin

    B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of

    Abstract: The Downing lab investigates the intricate biophysical interactions between cells and their environment, elucidating their role in modulating adult cell behavior and phenotypic transitions via epigenetic regulation of gene …

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  • Fri 31
    May 31, 2024 @ 2:00 pm - 4:00 pm KST

    Lucas MacQuarrie, Data driven governing equations approximation using deep neural networks

    We will discuss about “Data driven governing equations approximation using deep neural networks” Journal of Computational Physics (2019). Abstract We present a numerical framework for approximating unknown governing equations using …

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  • June 2024

  • Fri 7
    June 7, 2024 @ 2:00 pm - 4:00 pm KST

    Olive Cawiding, Inferring Causal Gene Regulatory Networks from Coupled Single-Cell Expression Dynamics Using Scribe

    In this talk, we discuss the paper "Inferring Causal Gene Regulatory Networks from Coupled Single-Cell Expression Dynamics Using Scribe", by Xiaojie Qiu  et.al., Cell Syst. 2020. Abstract  Here, we present …

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  • Fri 14
    June 14, 2024 @ 2:00 pm - 4:00 pm KST

    Hyun Kim, MultiK: an automated tool to determine optimal cluster numbers in single-cell RNA sequencing datamics data with TDEseq

    In this talk, we discuss the paper, "MultiK: an automated tool to determine optimal cluster numbers in single-cell RNA sequencing data" by Siyao Liu et.al.  Genome Biology, 2024. Abstract  Single-cell …

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  • Fri 21
    June 21, 2024 @ 2:00 pm - 4:00 pm KST

    Brenda Gavina, A modified shuffled frog leaping algorithm with inertia weight

    In this talk, we will discuss the paper, "A modified shuffled frog leaping algorithm with inertia weight", by Zhuanzhe Zhao et.al. , Scientific Reports, 2024. Abstract  The shuffled frog leaping …

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  • Tue 25
    June 25, 2024 @ 2:00 pm - 3:00 pm KST

    Hyungsuk Tak, Statistical Challenges in Astronomical Time Delay Estimation (Cancelled)

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    I present time delay estimation problems in astronomy as a part of time delay cosmography to infer the Hubble constant, the current expansion rate of the Universe. Time delay cosmography …

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  • July 2024

  • Fri 12
    July 12, 2024 @ 2:00 pm - 4:00 pm KST

    Seokjoo Chae, Holimap: an accurate and efficient method for solving stochastic gene network dynamics

    In this talk, we discuss the paper "Holimap: an accurate and efficient method for solving stochastic gene network dynamics" by Chen Jia and Ramon Grima, bioRxiv, 2024. Abstract  Gene-gene interactions are crucial to …

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  • Fri 19
    July 19, 2024 @ 2:00 pm - 4:00 pm KST

    Dongju Lim, Stochastic representations of ion channel kinetics and exact stochastic simulation of neuronal dynamics.

    In this talk, we discuss the paper "Stochastic representations of ion channel kinetics and exact stochastic simulation of neuronal dynamics" by D. F. Anderson, B. Ermentrout and P. J. Thomas, …

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  • Fri 26
    July 26, 2024 @ 2:00 pm - 4:00 pm KST

    Eui Min Jeong, Temperature compensation through kinetic regulation in biochemical oscillators.

    In this talk, we discuss the paper "Temperature compensation through kinetic regulation in biochemical oscillators" by HaochenFu, Chenyi Fei, Qi Ouyang, and Yuhai Tu, to appear in PNAS.  Abstract  Although individual kinetic …

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  • Wed 31
    July 31, 2024 @ 10:30 am - 12:00 pm KST

    Summer Intern workshop 2024

      Presentor(s) Mentor Talk title Jaehun Jeong Gyuyoung Hwang Analyzing coupled SCN cell frequencies of mammals for multi-step transcriptional model Hyunsuk Choo, Yonghee Lee Seok Joo Chae Development of a …

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IBS 의생명수학그룹 Biomedical Mathematics Group
기초과학연구원 수리및계산과학연구단 의생명수학그룹
대전 유성구 엑스포로 55 (우) 34126
IBS Biomedical Mathematics Group (BIMAG)
Institute for Basic Science (IBS)
55 Expo-ro Yuseong-gu Daejeon 34126 South Korea
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