Papers

Please visit the link at Google Scholar for publications until 2020 [Click Here]

†: co-1st authors, *: co-corresponding authors

Submitted / Preprint

  1. Yasuko O. Abe, Hikari Yoshitane, Dae Wook Kim, Michinori Koebis, Atsu Aiba, Jae Kyoung Kim*, and Yoshitaka Fukada*, Rhythmic transcription of Bmal1 stabilizes the circadian timekeeping system in mammals, 2021
    Last update: September 11, 2021
  2. Jae Kyoung Kim (2021). Tick, Tock, Circadian Clocks. In Pavel Kraikivski (Ed.) Case Studies in Systems Biology (pp. 48-64). Springer International Publishing. doi: 10.1007/978-3-030-67742-8
    Last update: September 11, 2021
  3. Hyukpyo Hong, Boseung Choi, Jae Kyoung Kim (2021), Beyond the Michaelis–Menten: Bayesian Inference for Enzyme Kinetic Analysis. In Quentin Vanhaelen (Ed.) Computational Methods for Estimating the Kinetic Parameters of Biological Systems, Springer US, doi: 10.1007/978-1-0716-1767-0
    Last update: September 11, 2021
  4. Dae Wook Kim†, Hyukpyo Hong†, and Jae Kyoung Kim, Systematic inference identifies a major source of heterogeneity in cell signaling dynamics: the rate-limiting step number, 2021
    Last update: September 11, 2021
  5. Eui Min Jeong†, Miri Kwon†, Eunjoo Cho†, Sang Hyuk Lee, Eun Young Kim*, and Jae Kyoung Kim*, Systematic modeling-driven experiments identify distinct molecular clockworks underlying hierarchically organized pacemaker neurons, 2021
    Last update: September 11, 2021
  6. Yun Min Song†, Hyukpyo Hong†, and Jae Kyoung Kim,  Universally valid reduction of multiscale stochastic biochemical systems using simple non-elementary propensities, 2021
    bioRxiv10.1101/2021.04.08.438974v1Last update: September 11, 2021

Accepted

  1. Seunggyu Lee, Non-iterative compact operator splitting scheme for Allen–Cahn equation, Computational & Applied Mathematics, 2021
    Last update: September 14, 2021
  2. Mi-Sun Hur, Seunggyu Lee, Tong Mook Kang, and Chang-Seok Oh, The three muscle layers in the pyloric sphincter and their possible function during antropyloroduodenal motility, Scientific Reports, 2021
    Last update: September 11, 2021

Published

2021

  1. Mark Jayson Cortez, Hyukpyo Hong, Boseung Choi*, Jae Kyoung Kim*, and Krešimir Josic*, Hierarchical Bayesian models of transcriptional and translational regulation processes with delays, Bioinformatics, 2021
    bioRxiv10.1101/2021.08.16.456485v1Last update: September 11, 2021
  2. Youri G. Bolsius, Matias D. Zurbriggen, Jae Kyoung Kim, Martien J.Kas, Peter Meerlo, Sara J.Aton, and Robbert Havekes, The role of clock genes in sleep, stress and memory, Biochemical Pharmacology, 2021
    Last update: September 11, 2021
  3. Hyukpyo Hong†, Jinsu Kim†, M Ali Al-Radhawi, Eduardo Sontag, and Jae Kyoung Kim,  Derivation of stationary distributions of biochemical reaction networks via structure transformation, Communications Biology, 2021
    bioRxiv10.1101/2021.03.23.436681v1Last update: September 11, 2021
  4. Jonathan Tyler, Daniel Forger, and Jae Kyoung Kim, Inferring causality in biological oscillators, Bioinformatics, 2021
    bioRxiv10.1101/2021.03.18.435997v1Last update: September 11, 2021
  5. Jaehyoung Hong†, Su Jung Choi†, Se Ho Park, Hyukpyo Hong, Victoria Booth, Eun Yeon Joo*, and Jae Kyoung Kim*, Personalized sleep-wake patterns aligned with circadian rhythm relieve daytime sleepiness, iScience, 2021
    bioRxiv10.1101/2021.03.15.435366v1Last update: September 15, 2021