A cell atlas foundation model for scalable search of similar human cells – Kevin Spinicci

B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

In this talk, we discuss the paper "A cell atlas foundation model for scalable search of similar human cells" by Graham Heimberg et.al., Nature, 2024 at the Journal Club. Abstract Single-cell RNA sequencing has profiled hundreds of millions of human cells across organs, diseases, development and perturbations to date. Mining these growing atlases could reveal

Method for cycle detection in sparse, irregularly sampled, long-term neuro-behavioral timeseries – Brenda Gavina

B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

In this talk, we discuss the paper "Method for cycle detection in sparse, irregularly sampled, long-term neuro-behavioral timeseries: Basis pursuit denoising with polynomial detrending of long-term, inter-ictal epileptiform activity" by Irena Balzekas et.al., Plos Com., 2024. Abstract Numerous physiological processes are cyclical, but sampling these processes densely enough to perform frequency decomposition and subsequent analyses

Constraining nonlinear time series modeling with the metabolic theory of ecology – Olive Cawiding

B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

In this talk, we discuss the paper "Constraining nonlinear time series modeling with the metabolic theory of ecology" by S.B. Munch et.al., PNAS, 2023. Abstract Forecasting the response of ecological systems to environmental change is a critical challenge for sustainable management. The metabolic theory of ecology (MTE) posits scaling of biological rates with temperature, but

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