Following the energy in cellular information processing
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: John Hopfield first pointed out that there are barriers - we call them Hopfield barriers - …
12 events found.
Seminar
Events
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ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)
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Solving Singular Control Problems in Mathematical Biology, Using PASA
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “Solving Singular Control Problems in Mathematical Biology, Using PASA”, Atkins et al., arXiv, 2020 In this paper, we will demonstrate how to use a nonlinear polyhedral …
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Quantitative comparisons between models and data to provide new insights in cell and developmental biology
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Simple mathematical models have had remarkable successes in biology, framing how we understand a host of …
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A Random Matrix Theory Approach to Denoise Single-Cell Data
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “A Random Matrix Theory Approach to Denoise Single-Cell Data”, Aparicio et al., Patterns, 2020 Single-cell technologies provide the opportunity to identify new cellular states. However, a …
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The Graph convolutional Networks (GCN) with Persistent Homology and its applications 3/4
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofNeural Networks with the Persistent Diagrams and Graph Classification. We introduce the first paper connecting persistent diagrams to the Neural Networks by Carrier et al," A neural Network Layer for …
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Stiff-PINN: Physics-Informed Neural Network for Stiff Chemical Kinetics
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “Stiff-PINN: Physics-Informed Neural Network for Stiff Chemical Kinetics”, Ji et al., The Journal of Physical Chemistry A, 2020 The recently developed physics-informed neural network (PINN) has …
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Methods for characterizing circadian physiology from wearables
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofAbstract Non-invasive data collection in real-world settings with wearables provides a new opportunity for characterizing daily physiology. However, accurate and efficient characterization remains an open problem because the complex autoregressive …
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Information Integration and Energy Expenditure in Gene Regulation
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "Information Integration and Energy Expenditure in Gene Regulation", Estrada et al., Cell, 2016 Abstract: The quantitative concepts used to reason about gene regulation largely derive from …
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디지털 표현형의 진단 및 치료적 적용
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of디지털 표현형의 진단 및 치료적 적용 조철현(세종충남대학교병원) 디지털 표현형(digital phenotype)은 각 개개인이 일상생활에서 사용하는 다양한 디지털 기기를 통해서 실시간으로 얻어지는 다양한 형태의 데이터를 뜻하는 것으로, 디지털 기기의 사용이 보편화되면서 의료적 …
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The Generalized Multiset Sampler
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "The Generalized Multiset Sampler", Kim and MacEachern, The Journal of Computation and Graphical Statistics, 2021 Abstract: The multiset sampler, an MCMC algorithm recently proposed by Leman …
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Stem cell dynamics in the intestine and stomach
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofIn adult tissues, stem cells undergo clonal competition because they proliferate while the stem cell niche provides limited space. This clonal competition allows the selection of healthy stem cells over …
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Structure-based analysis of chemical reaction networks 1/2
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofAbstract: Inside living cells, chemical reactions form a large web of networks. Understanding the behavior of those complex reaction networks is an important and challenging problem. In many situations, it …