COVID19 – Mathematical Modeling and Machine Learning
Abstract This presentation include the following two topics. First of all, we consider a spread model of COVID-19 with time-dependent parameters via deep learning. We developed a SIR model with …
12 events found.
Seminar
Events
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B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of
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Stochastic processes as scientific instruments: efficient inference based on stochastic dynamical systems
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Questions about the mechanistic operation of biological systems are naturally formulated as stochastic processes, but confronting …
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The Oscillation Amplitude, Not the Frequency of Cytosolic Calcium, Regulates Apoptosis Induction
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “The Oscillation Amplitude, Not the Frequency of Cytosolic Calcium, Regulates Apoptosis Induction ”, Qi et al., iScience, 2020 Abstract: Although a rising concentration of cytosolic Ca2+ has …
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A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells”, Unosson et al., bioRxiv, 2021 We propose …
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A temporal signaling code to specify immune responses
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Immune sentinel cells must initiate the appropriate immune response upon sensing the presence of diverse pathogens …
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Balanced truncation for model reduction of biological oscillators
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “Balanced truncation for model reduction of biological oscillators”, Padoan et al., Biological Cybernetics, 2021 Model reduction is a central problem in mathematical biology. Reduced order models …
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Scaling in development
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Within a given species, fluctuations in egg or embryo size is unavoidable. Despite this, the gene …
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Filtering and inference for stochastic oscillators with distributed delays
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about “Filtering and inference for stochastic oscillators with distributed delays”, Calderazzo et al., Bioinformatics, 2018 at the Journal Club Motivation The time evolution of molecular species involved …
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Inferring causality in biological oscillators
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofAbstract TBA
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Systems pharmacology towards personalized chronotherapy
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Chronotherapeutics- that is administering drugs following the patient's biological rhythms over the 24 h span- may …
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The Graph convolutional Networks (GCN) with Persistent Homology and its application 1/4
B378 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of(1) GCN and its Application. We introduce the GCN by reviewing the monumental paper " Semi-Supervised Classification with the Graph Convolutional Networks", ICLR 2018 by Kipf and Welling. We are …
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Biofluiddynamics of reproduction
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: From fertilization to birth, successful mammalian reproduction relies on interactions of elastic structures with a fluid …