Eui Min Jeong, Mathematical modeling of circadian clocks of mammal and Drosophila to reveal molecular mechanism for rhythm generation
KAIST E2-1 room 3221 E2-1 building, Daejeon, Daejeon, Korea, Republic ofYun Min Song, On the quasi-steady-state approximation in an open Michaelis-Menten reaction mechanism
KAIST E2-1 room 3221 E2-1 building, Daejeon, Daejeon, Korea, Republic ofWe will discuss about "On the quasi-steady-state approximation in an open Michaelis-Menten reaction mechanism", bioRxiv (2021). The conditions for the validity of the standard quasi-steady-state approximation in the Michaelis--Menten mechanism …
Hyukpyo Hong, Frequency Spectra and the Color of Cellular Noise
KAIST E2-1 room 3221 E2-1 building, Daejeon, Daejeon, Korea, Republic ofWe will discuss about "Frequency Spectra and the Color of Cellular Noise", bioRxiv (2020). The invention of the Fourier integral in the 19th century laid the foundation for modern spectral …
Jaewoo Park, Introduction to RcppArmadillo for Statistical Programming
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)The speaker presents how to use Rcpp (Seamless R and C++ Integration) and RcppArmadillo packages ('Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library) for statistical programming.
Eui Min Jeong, Pairing of segmentation clock genes drives robust pattern formation
Tea Room, IBS Daejeon, Daejeon, Korea, Republic ofWe will discuss about "Pairing of segmentation clock genes drives robust pattern formation", Zinani et al., Nature (2021) Gene expression is an inherently stochastic process; however, organismal development and homeostasis …
Dae Wook Kim, Maximum Entropy Framework for Predictive Inference of Cell Population Heterogeneity and Responses in Signaling Networks
Tea Room, IBS Daejeon, Daejeon, Korea, Republic ofWe will discuss about "Maximum Entropy Framework for Predictive Inference of Cell Population Heterogeneity and Responses in Signaling Networks", Dixit et al., Cell Systems (2020) Predictive models of signaling networks …
Seokjoo Chae, Unified rational protein engineering with sequence-based deep representation learning
Tea Room, IBS Daejeon, Daejeon, Korea, Republic ofIn this presentation, we are going to discuss the paper, "Unified rational protein engineering with sequence-based deep representation learning" Abstract Rational protein engineering requires a holistic understanding of protein function. …
Dae Wook Kim, Revealing causes of disrupted wake-sleep cycles using mathematical model (BRIC Webinar)
Registration is required to attend this talk (link: https://www.ibric.org/seminar/#), and it will be presented in Korean. Abstract: 생체 시계 (Circadian clock)를 구성하는 핵심 단백질인 PERIOD (PER)의 양은 12시간 동안 증가했다가 …
Daniel Forger, The mathematics of the wearables with applications to circadian rhythms and sleep
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Millions of individuals track their steps, heart rate, and other physiological signals through wearables. This data …
Yun Min Song, A stochastic oscillator model simulates the entrainment of vertebrate cellular clocks by light
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "A stochastic oscillator model simulates the entrainment of vertebrate cellular clocks by light", Kumpost et al., bioRxiv (2021) The circadian clock is a cellular mechanism that …
Highly accurate fluorogenic DNA sequencing with information theory–based error correction
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "Highly accurate fluorogenic DNA sequencing with information theory–based error correction", Chen et al., Nature Biotechnology (2017) Eliminating errors in next-generation DNA sequencing has proved challenging. Here …