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Biomedical Mathematics Group

Biomedical Mathematics Group

기초과학연구원 의생명수학그룹

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  • August 2025

  • Fri 8
    August 8 @ 2:00 pm - 4:00 pm KST

    Circadian rhythm analysis using wearable-based accelerometry as a digital biomarker of aging and healthspan – Yun Min Song

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Circadian rhythm analysis using wearable-based accelerometry as a digital biomarker of aging and healthspan" by J. Shim et.al., npj digital medicine, 2024. Abstract …

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  • Fri 22
    August 22 @ 3:30 pm - 5:30 pm KST

    Statistical method scDEED for detecting dubious 2D single-cell embeddings and optimizing t-SNE and UMAP hyperparameters – Kevin Spinicci

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Statistical method scDEED for detecting dubious 2D single-cell embeddings and optimizing t-SNE and UMAP hyperparameters" by L. Xia et.al. Nature Communications, 2024. Abstract …

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  • Fri 29
    August 29 @ 2:00 pm - 4:00 pm KST

    Binning as a Pretext Task: Improving Self-Supervised Learning in Tabular Domains – Jinwoo Hyun

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Binning as a Pretext Task: Improving Self-Supervised Learning in Tabular Domains" by K. Lee. Abstract The ability of deep networks to learn superior …

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  • September 2025

  • Wed 3
    September 3 @ 4:00 pm - 5:00 pm KST

    Weak form SciML in the Life Sciences: The Weak Form is Stronger than you Think – David Bortz

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract The creation and inference of mathematical models is central to modern scientific discovery in the life sciences. As more realism is demanded of models, however, the conventional framework of …

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  • Fri 5
    September 5 @ 2:00 pm - 4:00 pm KST

    Physics-constrained neural ordinary differential equation models to discover and predict microbial community dynamics – Kang Min Lee

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Physics-constrained neural ordinary differential equation models to discover and predict microbial community dynamics" by J. Thompson et al., bioarxiv, 2025. Abstract Microbial communities …

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  • Fri 12
    September 12 @ 2:00 pm - 4:00 pm KST

    Decomposing causality into its synergistic, unique, and redundant components – Olive Cawiding

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Decomposing causality into its synergistic, unique, and redundant components" by Álvaro Martínez-Sánchez et al., Nature Communications, 2024. Abstract Causality lies at the heart …

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  • Fri 19
    September 19 @ 4:00 pm - 6:00 pm KST

    SCassist: An AI Based Workflow Assistant for Single-Cell Analysis – Aqsa Awan

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "SCassist: An AI Based Workflow Assistant for Single-Cell Analysis " by Vijayaraj Nagarajan et al., bioarxiv, 2025.  Abstract Single-cell RNA sequencing (scRNA-seq) data analysis …

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  • Wed 24
    September 24 @ 4:00 pm - 5:00 pm KST

    Sleep as part of the 24-hour day: Methods and Applications in Oncology – Joshua Wiley

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract Sleep is commonly analysed as an independent factor. However, because of the 24-hour constraints on a day, changes in sleep will co-occur with changes in remaining time use. This …

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  • Fri 26
    September 26 @ 10:00 am - 11:30 am KST

    Tackling inter-subject variability in smartwatch data using factorization models – Myna Lim

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    In this talk, we discuss the paper "Tackling inter-subject variability in smartwatch data using factorization models" by Arman Naseri et. al, Scientific Reports, 2025. Abstract Smartwatches enable longitudinal and continuous …

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  • Mon 29
    September 29 @ 4:00 pm - 6:00 pm KST

    Excess Mortality, Two Lenses : Healthcare Access and Cross-National Time Trends – Daeil Jang

    B232 Seminar Room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Daejeon, Korea, Republic of

    Abstract Background : Excess mortality captures both the direct and indirect impacts of the pandemic. We examine (1) within-country heterogeneity by healthcare access over distinct viral waves in Korea, and …

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  • October 2025

  • Wed 1
    October 1 @ 4:00 pm - 5:00 pm KST

    Topological Data Analysis for Multiscale Biology – Heather Harrington

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract Many processes in the life sciences are inherently multi-scale and dynamic. Spatial structures and patterns vary across levels of organisation, from molecular to multi-cellular to multi-organism. With more sophisticated …

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  • Wed 15
    October 15 @ 4:00 pm - 5:00 pm KST

    Developing time-series machine learning methods to unlock new insights from large-scale biomedical resources – Aiden Doherty

    ZOOM ID: 997 8258 4700 (Biomedical Mathematics Online Colloquium) (pw: 1234)

    Abstract Smartphones and wearable devices provide a major opportunity to transform our understanding of the mechanisms, determinants, and consequences of diseases. For example, around 9 in 10 people own a …

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IBS 의생명수학그룹 Biomedical Mathematics Group
기초과학연구원 수리및계산과학연구단 의생명수학그룹
대전 유성구 엑스포로 55 (우) 34126
IBS Biomedical Mathematics Group (BIMAG)
Institute for Basic Science (IBS)
55 Expo-ro Yuseong-gu Daejeon 34126 South Korea
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