기초과학연구원 의생명수학그룹
We will discuss about “A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells”, Unosson et al., bioRxiv, 2021 We propose …
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Immune sentinel cells must initiate the appropriate immune response upon sensing the presence of diverse pathogens …
We will discuss about “Balanced truncation for model reduction of biological oscillators”, Padoan et al., Biological Cybernetics, 2021 Model reduction is a central problem in mathematical biology. Reduced order models …
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Within a given species, fluctuations in egg or embryo size is unavoidable. Despite this, the gene …
We will discuss about “Filtering and inference for stochastic oscillators with distributed delays”, Calderazzo et al., Bioinformatics, 2018 at the Journal Club Motivation The time evolution of molecular species involved …
Abstract TBA
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Chronotherapeutics- that is administering drugs following the patient's biological rhythms over the 24 h span- may …
(1) GCN and its Application. We introduce the GCN by reviewing the monumental paper " Semi-Supervised Classification with the Graph Convolutional Networks", ICLR 2018 by Kipf and Welling. We are …
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: From fertilization to birth, successful mammalian reproduction relies on interactions of elastic structures with a fluid …
We will discuss about “Detecting and quantifying causal associations in large nonlinear time series datasets”, Runge et al., Science Advances, 2019 Identifying causal relationships and quantifying their strength from observational …
Simplicial Complexes, Persistent Homology and Persistent Diagrams. After a brief review on the persistent homology( Cohen-Steiner, Edelsbrunner, Harer,2010), we discuss constructive procedures persistent diagrams from the persistent homology. Code; 9 …
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: John Hopfield first pointed out that there are barriers - we call them Hopfield barriers - …