기초과학연구원 의생명수학그룹
We will discuss about "Extending Transfer Entropy Improves Identification of Effective Connectivity in a Spiking Cortical Network Model", Ito et. al., PloS ONE, 2011 Transfer entropy (TE) is an information-theoretic measure …
We will discuss about "Independent Markov Decomposition: Towards modeling kinetics of biomolecular complexes", Hempel et. al., bioRxiv, 2021 In order to advance the mission of in silico cell biology, modeling the interactions …
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Non-Markov models of stochastic biochemical kinetics often incorporate explicit time delays to effectively model large numbers …
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Accurate assessment of circadian timing is critical to many applications, including timing of drug delivery, prediction …
We will discuss about "DNA as a universal substrate for chemical kinetics ", Soloveichik et al., PNAS (2009) Molecular programming aims to systematically engineer molecular and chemical systems of autonomous …
Abstract: TBA
Abstract: The biological master clock, the suprachiasmatic nucleus (SCN) of a mouse, contains many (~20,000) clock cells heterogeneous, particularly with respect to their circadian period. Despite the inhomogeneity, within an …
Abstract: We consider the problem of nonparametric imputation using neural network models. Neural network models can capture complex nonlinear trends and interaction effects, making it a powerful tool for predicting …
We will discuss about "Collective Oscillations in coupled cell systems", Chen and Sinh, Bulletin of Mathematical Biology, 2021 We investigate oscillations in coupled systems. The methodology is based on the …
We will discuss about “DeepCME: A deep learning framework for solving the Chemical Master Equation,” Gupta et al., bioRxiv, 2021 Stochastic models of biomolecular reaction networks are commonly employed in …
Abstract: TBA
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Organisms have evolved an internal biological clock which allows them to temporally regulate and organize their …