Dynamics-based data science in biology
This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Life science has been a prosperous subject for a long time, and is still developing with …
12 events found.
Seminar
Events
-
-
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)
-
Mathematical modeling for infectious disease using epidemiological data
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofAbstract: TBA
-
Practical considerations for measuring the effective reproductive number
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofAbstract: TBA
-
Synthetic multistability in mammalian cells
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "Synthetic multistability in mammalian cells", Zhu et al., bioRxiv (2021) In multicellular organisms, gene regulatory circuits generate thousands of molecularly distinct, mitotically heritable states, through the …
-
Advice to my younger self
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Facebook live streaming: https://www.facebook.com/10226475900150025/videos/10226475902790091 Age brings the benefit of experience and looking back at my job as …
-
A Simple and Flexible Computational Framework for Inferring Sources of Heterogeneity from Single-Cell Dynamics
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "A Simple and Flexible Computational Framework for Inferring Sources of Heterogeneity from Single-Cell Dynamics", Dharmarajan et al., Cell Systems (2019) Single-cell time-lapse data provide the means …
-
Introduction to Bayesian ML/DL, with Application to Parameter Inference of Coupled Non-linear ODEs – Part 1
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofIn this talk, the speaker will present introductory materials about Bayesian Machine Learning. Abstract Gaussian process(GP) is a stochastic process such that the joint distribution of an arbitrary finite subset …
-
What is the role of oscillatory signals in intracellular systems?
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofOscillatory signals are ubiquitously observed in many different intracellular systems such as immune systems and DNA repair processes. While we know how oscillatory signals are created, we do not fully …
-
-
Introduction to Bayesian ML/DL, with Application to Parameter Inference of Coupled Non-linear ODEs – Part 2
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofIn this talk, the speaker will present introductory materials about Bayesian Machine Learning. Abstract The problem of approximating the posterior distribution (or density estimation in general) is a crucial problem …
-
Extending Transfer Entropy Improves Identification of Effective Connectivity in a Spiking Cortical Network Model
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "Extending Transfer Entropy Improves Identification of Effective Connectivity in a Spiking Cortical Network Model", Ito et. al., PloS ONE, 2011 Transfer entropy (TE) is an information-theoretic measure …
-
Independent Markov Decomposition: Towards modeling kinetics of biomolecular complexes
B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic ofWe will discuss about "Independent Markov Decomposition: Towards modeling kinetics of biomolecular complexes", Hempel et. al., bioRxiv, 2021 In order to advance the mission of in silico cell biology, modeling the interactions …
-
Neural network aided approximation and parameter inference of stochastic models of gene expression
ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Non-Markov models of stochastic biochemical kinetics often incorporate explicit time delays to effectively model large numbers …