기초과학연구원 의생명수학그룹
CI Jae Kyoung Kim released his new book, 수학이 생명의 언어라면 (If Mathematics is the Language of Biology), on August 22, 2024. The book explores how mathematical concepts can be applied to solve complex biomedical challenges. It is available at https://product.kyobobook.co.kr/detail/S000214091798.
On August 9th, Dr. Hwang gave a talk on “A universal description of stochastic oscillators” at the Journal Club.
On August 2nd, our student Yun Min Song gave a talk on “RNA velocity of single cells” at the Journal Club.
BIMAG Interns present their progress during the 2024 summer internship
| Presentor(s) | Mentor | Talk title |
|---|---|---|
| Jaehun Jeong | Gyuyoung Hwang | Analyzing coupled SCN cell frequencies of mammals for multi-step transcriptional model |
| Hyunsuk Choo, Yonghee Lee | Seok Joo Chae | Development of a data-driven causality detection method using Taken’s Theorem |
| Juhyeon Kim | Dongju Lim | Accurate initial condition for circadian pacemaker model estimating the circadian phase |
| Kyeongtae Ko | Dongju Lim | Accurate initial condition estimation of exposed individuals in SEIR model |
| Ashley L Lawas | Olive R Cawiding | Advancing causal inference in complex systems through ODE-based methods |
| Sieun Lee | Olive R Cawiding | Improving efficiency of sleep disorder diagnosis via SymScore |
| Daniel Shin, Anar Rzayev | Olive R Cawiding | Improving Sleep Disorder Diagnosis Questionnaire (SLEEPS) by integrating Lifestyle Factors into Machine-learning algorithms |
| Shubhangi Kumar | Pan Li | Modelling cardiac pacemaking dysfunction in heart failure progression |
| Yejin Lee | Pan Li | Modelling beta-adrenergic regulation of calcium dynamics in human ventricular myocytes |
| Hyungu Lee | Yun Min Song | PSG sleep pattern prediction from actigraphy data |
| Yujin Park | Yun Min Song | Validating the usefulness of anchor sleep from sleep-wake patterns using ESS |
| Yon Kim | Yun Min Song | Predicting sleep onset latency |
On 26th July, Dr. Jeong gave a talk on “Temperature compensation through kinetic regulation in biochemical oscillators” at the Journal Club.
On 19th July, our student Dongju Lim gave a talk on “Stochastic representations of ion channel kinetics and exact stochastic simulation of neuronal dynamics” at the Journal Club.
On July 12, Dr. Hyun Kim gave a talk at the BRIC academic webinar. The title of the presentation was ‘scLENS: Data-Driven Signal Detection for Unbiased scRNA-seq data analysis.’ The talk was recorded and uploaded to the BRIC YouTube channel.
지난 7월 12일 김현 박사가 BRIC 학술 웨비나에서 강연을 진행했습니다. 강연의 제목은 “scLENS: 단일 세포 RNA 시퀀싱 데이터분석을 위한 데이터기반 차원축소방법”였습니다. 강연은 녹화되어 BRIC 유튜브 채널에 업로드되었습니다.
On 12th July, Dr. Chae gave a talk on “Holimap: an accurate and efficient method for solving stochastic gene network dynamics” at the BIMAG Journal Club. Many interns participated.
On July 10th, CI Professor Jae Kyoung Kim was appointed as the Chief Editor of the journal Current Opinion in Systems Biology. Congratulations!
지난 7월 10일 CI 김재경 교수가 Current Opinion in Systems Biology 저널의 cheif editor로 선정되었습니다. 축하드립니다!
BIMAG members participated in the KSMB-SMB 2024 Seoul event held from June 30 to July 5.
BIMAG 멤버들이 지난 6월 30일부터 7월 5일까지 열린 KSMB-SMB 2024 Seoul 행사에 참여했습니다.
CI Professor Jae Kyoung Kim gave a plenary talk and two mini-symposium talks
CI 김재경 교수는 Plenary 강연과 두 개의 미니 심포지엄 강연을 발표했습니다.
Plenary: Inference of Dynamic Networks in Biological Systems
MS 1: Mastering noise in rhythm generation: strategies for utilization and avoidance
MS 2: Beyond the Michaelis- Menten: Accurate Prediction of Drug Interactions Through Cytochrome P450 3A4 Induction
Dr. Eui Min and Dr. Seok Joo, along with Ph.D. students Yun Min, DongJu, and Olive, also gave presentations at the mini-symposium.
의민, 석주 박사와 윤민, 동주, Olive 학생도 미니심포지움에서 발표를 진행했습니다.
Eui Min: Combined multiple transcriptional repression mechanisms generate ultrasensitivity and robust oscillations
Seok Joo: Collective behavior of proteins filters spatiotemporal noise for robust circadian rhythms
Yun Min: A real-time, personalized sleep intervention using mathematical modelling and wearable devices / Universally valid reduction of multiscale stochastic biochemical systems using simple non-elementary propensities / Noisy Delay Denoises Biochemical Oscillators
Dongju: Accurate Prediction of Mood Episodes Using Sleep and Circadian Rhythm Features from Wearables
Olive: Model-based detection of causal relationships
Dr. Gyuyoung and Dr. Kevin, along with students Juhyeon, Seolah, Hyunsuk, and Hyeongjun, gave presentations at the poster session.
규영, Kevin 박사 및 주현, 설아, 현석, 형준 학생은 포스터 세션에서 발표를 진행했습니다.
Gyuyoung: On the interactions of flocking particles with the Stokes flow in an infinite channel
Kevin: Computational and mathematical approaches to understand glioma cells metabolism: characterization from transcriptomic data and focus on HIF pathways
Juhyeon: The Algorithm for Initial Condition Decision in Circadian Pacemaker Model to Predict Accurate Circadian Rhythm Phase
Seolah: Beyond Homogeneity: Assessing the Validity of the Michaelis-Menten Rate Law in Spatially Heterogeneous Environments
Hyunsuk: Inferring the network structure of a plankton community using time series data
Hyeong Jun: Accurate and precise parameter estimation and type identification in enzyme inhibition
We had the opportunity to interact and enjoy time with numerous outstanding mathematical biologists from around the world who attended the conference.
학회에 참석한 전세계의 수많은 훌륭한 수리생물학자들과 교류하고 함께 즐기는 시간을 가졌습니다.