Seokjoo Chae, Unified rational protein engineering with sequence-based deep representation learning

Tea Room, IBS Daejeon, Daejeon, Korea, Republic of

In this presentation, we are going to discuss the paper, "Unified rational protein engineering with sequence-based deep representation learning" Abstract Rational protein engineering requires a holistic understanding of protein function. Here, we apply deep learning to unlabeled amino-acid sequences to distill the fundamental features of a protein into a statistical representation that is semantically rich

Dae Wook Kim, Revealing causes of disrupted wake-sleep cycles using mathematical model (BRIC Webinar)

Registration is required to attend this talk (link: https://www.ibric.org/seminar/#), and it will be presented in Korean. Abstract: 생체 시계 (Circadian clock)를 구성하는 핵심 단백질인 PERIOD (PER)의 양은 12시간 동안 증가했다가 12시간 동안 감소하며 24시간 주기로 변화한다. 이 24시간 주기의 PER 리듬이 우리 몸의 시계 역할을 하여 수면 시간 등 다양한 행동 및 생리 작용의 시간을

Daniel Forger, The mathematics of the wearables with applications to circadian rhythms and sleep

ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)

This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Millions of individuals track their steps, heart rate, and other physiological signals through wearables. This data scale is unprecedented; I will describe several of our apps and ongoing studies, each of which collects wearable and mobile data from thousands of users,

Yun Min Song, A stochastic oscillator model simulates the entrainment of vertebrate cellular clocks by light

B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of

We will discuss about "A stochastic oscillator model simulates the entrainment of vertebrate cellular clocks by light", Kumpost et al., bioRxiv (2021) The circadian clock is a cellular mechanism that synchronizes various biological processes with respect to the time of the day. While much progress has been made characterizing the molecular mechanisms underlying this clock,

Highly accurate fluorogenic DNA sequencing with information theory–based error correction

B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of

We will discuss about "Highly accurate fluorogenic DNA sequencing with information theory–based error correction", Chen et al., Nature Biotechnology (2017) Eliminating errors in next-generation DNA sequencing has proved challenging. Here we present error-correction code (ECC) sequencing, a method to greatly improve sequencing accuracy by combining fluorogenic sequencing-by-synthesis (SBS) with an information theory–based error-correction algorithm. ECC

Livestream

Dynamics-based data science in biology

ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)

This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Abstract: Life science has been a prosperous subject for a long time, and is still developing with high speed now. One of its major aims is to study the mechanisms of various biological processes on the basis of biological big-data. Many statistics-based

Synthetic multistability in mammalian cells

B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of

We will discuss about "Synthetic multistability in mammalian cells", Zhu et al., bioRxiv (2021) In multicellular organisms, gene regulatory circuits generate thousands of molecularly distinct, mitotically heritable states, through the property of multistability. Designing synthetic multistable circuits would provide insight into natural cell fate control circuit architectures and allow engineering of multicellular programs that require

Livestream

Advice to my younger self

ZOOM ID: 709 120 4849 (ibsbimag) (pw: 1234)

This talk will be presented online. Zoom link: 709 120 4849 (pw: 1234) Facebook live streaming: https://www.facebook.com/10226475900150025/videos/10226475902790091 Age brings the benefit of experience and looking back at my job as a professor, there are a couple of things that fall into the category “I wish someone had told me that earlier”. In this seminar, I

A Simple and Flexible Computational Framework for Inferring Sources of Heterogeneity from Single-Cell Dynamics

B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of

We will discuss about "A Simple and Flexible Computational Framework for Inferring Sources of Heterogeneity from Single-Cell Dynamics", Dharmarajan et al., Cell Systems (2019) Single-cell time-lapse data provide the means for disentangling sources of cell-to-cell and intra-cellular variability, a key step for understanding heterogeneity in cell populations. However, single-cell analysis with dynamic models is a

Introduction to Bayesian ML/DL, with Application to Parameter Inference of Coupled Non-linear ODEs – Part 1

B305 Seminar room, IBS 55 Expo-ro Yuseong-gu, Daejeon, Korea, Republic of

In this talk, the speaker will present introductory materials about Bayesian Machine Learning. Abstract Gaussian process(GP) is a stochastic process such that the joint distribution of an arbitrary finite subset of the random variables is a multivariate normal. It plays a fundamental role in Bayesian machine learning as it can be interpreted as a prior

IBS 의생명수학그룹 Biomedical Mathematics Group
기초과학연구원 수리및계산과학연구단 의생명수학그룹
대전 유성구 엑스포로 55 (우) 34126
IBS Biomedical Mathematics Group (BIMAG)
Institute for Basic Science (IBS)
55 Expo-ro Yuseong-gu Daejeon 34126 South Korea
Copyright © IBS 2021. All rights reserved.