In this talk, we discuss the paper "Quantifying the energy landscape of high-dimensional oscillatory systems by diffusion decomposition" by S. Bian et.al., Cell Reports Physical Science, 2025. Abstract High-dimensional networks producing oscillatory dynamics are ubiquitous in biological systems. Unraveling the mechanism of oscillatory dynamics in biological networks with stochastic perturbations becomes of paramount significance. Although …
Journal Club
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In this talk, we discuss the paper "Circadian rhythm analysis using wearable-based accelerometry as a digital biomarker of aging and healthspan" by J. Shim et.al., npj digital medicine, 2024. Abstract Recognizing the pivotal role of circadian rhythm in the human aging process and its scalability through wearables, we introduce CosinorAge, a digital biomarker of aging … |
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In this talk, we discuss the paper "Context-aware deconvolution of cell–cell communication with Tensor-cell2cell" by E. Armingol et.al. Nature Communications, 2022. Abstract Cell interactions determine phenotypes, and intercellular communication is shaped by cellular contexts such as disease state, organismal life stage, and tissue microenvironment. Single-cell technologies measure the molecules mediating cell–cell communication, and emerging computational … |
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In this talk, we discuss the paper "Binning as a Pretext Task: Improving Self-Supervised Learning in Tabular Domains" by K. Lee. Abstract The ability of deep networks to learn superior representations hinges on leveraging the proper inductive biases, considering the inherent properties of datasets. In tabular domains, it is critical to effectively handle heterogeneous features … |
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