On December 16, 2022, Eui Min Jeong gave a talk on “Role of DNA binding sites and slow unbinding kinetics in titration-based oscillators”, Karapetyan, Sargis, and Nicolas E. Buchler, Physical Review E 92.6 (2015): 062712. at the Journal Club.
Hyukpyo Hong gave a talk on “Model Reduction for the Chemical Master Equation: an Information-Theoretic Approach” at the Journal Club
On November 04, 2022, Hyukpyo Hong gave a talk on “Model Reduction for the Chemical Master Equation: an Information-Theoretic Approach,” Öcal, Kaan, Guido Sanguinetti, and Ramon Grima., arXiv preprint arXiv:2210.05329 (2022) at the Journal Club.
Seokjoo Chae gave a talk on “Inferring microenvironmental regulation of gene expression from single-cell RNA sequencing data using scMLnet with an application to COVID-19” at the Journal Club
On October 28, 2022, Seokjoo Chae gave a talk on “Inferring microenvironmental regulation of gene expression from single-cell RNA sequencing data using scMLnet with an application to COVID-19,” Cheng, Jinyu, et al., Briefings in bioinformatics 22.2 (2021): 988-1005. at the Journal Club.
Yun Min Song gave a talk on “Rhythmicity is linked to expression cost at the protein level but to expression precision at the mRNA level” at the Journal Club
On October 21, 2022, Yun Min Song gave a talk on “Rhythmicity is linked to expression cost at the protein level but to expression precision at the mRNA level,” David Laloum, and Marc Robinson-Rechavi, PLoS computational biology 18.9 (2022) at the Journal Club.
Bryan Hernandez gave a talk on “Cell clustering for spatial transcriptomics data with graph neural networks” at the Journal Club
On September 30, 2022, Bryan Hernandez gave a talk on “Absolute concentration robustness in networks with low-dimensional stoichiometric subspace,” Meshkat, Nicolette, Anne Shiu, and Angelica Torres., Vietnam Journal of Mathematics 50.3 (2022) at the Journal Club.
Aurelio de los Reyes V gave a talk on “Physics-informed neural networks for PDE-constrained optimization and control” at the Journal Club
On September 16, 2022, Aurelio de los Reyes V gave a talk on “Physics-informed neural networks for PDE-constrained optimization and control”, Barry-Straume, Jostein, et al., arXiv preprint arXiv:2205.03377 (2022) at the Journal Club.
Seokmin Ha gave a talk on “Inferring Regulatory Networks from Expression Data Using Tree-Based Methods” at the Journal Club
On August 26, 2022, Seokmin Ha gave a talk on “Inferring Regulatory Networks from Expression Data Using Tree-Based Methods” Huynh-Thu et al., PLoS ONE (2010) at the Journal Club.
Hyukpyo Hong gave a talk on “Molecular convolutional neural networks with DNA regulatory circuits” at the Journal Club
On August 12, 2022, Hyukpyo Hong gave a talk on “Molecular convolutional neural networks with DNA regulatory circuits”, Pei, Hao, et al., Nature Machine Intelligence (2022) at the Journal Club.
Hyeontae Jo gave a talk on “Neural Ordinary Differential Equations” at the Journal Club
On August 05, 2022, Hyeontae Jo gave a talk on “Neural Ordinary Differential Equations”, Chen, Ricky TQ, et al., Advances in neural information processing systems 31 (2018) at the Journal Club.
Seokjoo Chae gave a talk on “Learning stable and predictive structures in kinetic systems” at the Journal Club
On July 29, 2022, Seokjoo Chae gave a talk on “Learning stable and predictive structures in kinetic systems”, Niklas Pfister , Stefan Bauer, and Jonas Peters. PNAS, 2019 at the Journal Club.