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X-WR-CALNAME:Biomedical Mathematics Group
X-ORIGINAL-URL:https://www.ibs.re.kr/bimag
X-WR-CALDESC:Events for Biomedical Mathematics Group
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BEGIN:VTIMEZONE
TZID:Asia/Seoul
BEGIN:STANDARD
TZOFFSETFROM:+0900
TZOFFSETTO:+0900
TZNAME:KST
DTSTART:20250101T000000
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BEGIN:VEVENT
DTSTART;TZID=Asia/Seoul:20260506T160000
DTEND;TZID=Asia/Seoul:20260506T170000
DTSTAMP:20260409T182456
CREATED:20260205T074722Z
LAST-MODIFIED:20260311T121631Z
UID:12189-1778083200-1778086800@www.ibs.re.kr
SUMMARY:Data-driven discovery of biological oscillator models - Lendert Gelens
DESCRIPTION:Oscillatory dynamics are a found everywhere in living systems\, underlying processes such as metabolic regulation\, cell division\, and embryonic development. Identifying the mechanisms that generate these rhythms is challenging due to nonlinear interactions\, multiple time scales\, and limited access to all relevant variables. Data-driven approaches offer a promising route to infer dynamical models directly from time-series data. In this talk\, I will discuss our work on data-driven discovery of models for (bio)chemical oscillators. In particular\, I will present CLINE\, a neural-network–based framework that infers key geometric features of phase space\, such as nullclines\, from oscillatory data and uses this information to construct low-dimensional dynamical models. \n  \nZoom : 997 8258 4700 (pw : 1234)
URL:https://www.ibs.re.kr/bimag/event/data-driven-discovery-of-biological-oscillator-models-lendert-gelens/
LOCATION:B232 Seminar Room\, IBS\, 55 Expo-ro Yuseong-gu\, Daejeon\, Daejeon\, 34126\, Korea\, Republic of
CATEGORIES:Biomedical Mathematics Online Colloquium
ATTACH;FMTTYPE=image/jpeg:https://www.ibs.re.kr/bimag/cms/wp-content/uploads/2026/02/Gelens_Lendert_alumni-e1770278337776.jpg
ORGANIZER;CN="Jae Kyoung Kim":MAILTO:jaekkim@kaist.ac.kr
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Asia/Seoul:20260508T100000
DTEND;TZID=Asia/Seoul:20260508T120000
DTSTAMP:20260409T182456
CREATED:20260406T041825Z
LAST-MODIFIED:20260406T060631Z
UID:12360-1778234400-1778241600@www.ibs.re.kr
SUMMARY:Digital biomarkers for brain health: passive and continuous assessment from wearable sensors - Myna Lim
DESCRIPTION:In this tallk\, we discuss the paper “Digital biomarkers for brain health: passive and continuous assessment from wearable sensors” by Igor Matias et al.\, npj digital medicine\, 2026. \nAbstract\nContinuous and scalable monitoring of cognition and affective states is critical for the early detection of brain health\, which is currently limited by the burden of active assessments. This study investigated the potential of consumer-grade wearable and mobile technologies to passively predict 21 cognitive and mental health outcomes in real-world conditions. We collected data from 82 cognitively healthy adults\, including passively measured behaviour\, physiology\, and environmental exposures longitudinally\, for 10 months. Active data were gathered in four waves using validated patient- and performance-reported outcomes. Data quality assurance involved a data filtering resulting in average wearable data coverage of 96% per day. Artificial Intelligence-powered prediction was applied\, and performance was assessed using subject- and wave-dependent cross-validation. Cognitive and affective outcomes were predicted with low scaled errors. Patient-reported outcomes were more predictable than performance-based ones. Environmental and physiological metrics emerged as the most informative predictors. Passive multimodal data captured meaningful variability in cognition and affect\, demonstrating the feasibility of low-burden\, scalable approaches to continuous brain-health monitoring. Feature-importance analyses suggested that environmental exposures better explained inter-individual differences\, whereas physiological and behavioural rhythms captured within-person changes. These findings highlight the potential of everyday technologies for population-level tracking of brain-health and deviations from expected trajectories.
URL:https://www.ibs.re.kr/bimag/event/digital-biomarkers-for-brain-health-passive-and-continuous-assessment-from-wearable-sensors-myna-lim/
LOCATION:B232 Seminar Room\, IBS\, 55 Expo-ro Yuseong-gu\, Daejeon\, Daejeon\, 34126\, Korea\, Republic of
CATEGORIES:Journal Club
ORGANIZER;CN="Jae Kyoung Kim":MAILTO:jaekkim@kaist.ac.kr
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Asia/Seoul:20260515T100000
DTEND;TZID=Asia/Seoul:20260515T120000
DTSTAMP:20260409T182456
CREATED:20260403T080250Z
LAST-MODIFIED:20260406T060706Z
UID:12338-1778839200-1778846400@www.ibs.re.kr
SUMMARY:High-order Michaelis-Menten equations allow inference of hidden kinetic parameters in enzyme catalysis - Hyeong Jun Jang
DESCRIPTION:In this tallk\, we discuss the paper “High-order Michaelis-Menten equations allow inference of hidden kinetic parameters in enzyme catalysis” by Divya Singh et al.\, Nat. Comm.\, 2025. \nAbstract \nSingle-molecule measurements provide a platform for investigating the dynamical properties of enzymatic reactions. To this end\, the single-molecule Michaelis-Menten equation was instrumental as it asserts that the first moment of the enzymatic turnover time depends linearly on the reciprocal of the substrate concentration. This\, in turn\, provides robust and convenient means to determine the maximal turnover rate and the Michaelis-Menten constant. Yet\, the information provided by these parameters is incomplete and does not allow access to key observables such as the lifetime of the enzyme-substrate complex\, the rate of substrate-enzyme binding\, and the probability of successful product formation. Here we show that these quantities and others can be inferred via a set of high-order Michaelis-Menten equations that we derive. These equations capture universal linear relations between the reciprocal of the substrate concentration and distinguished combinations of turnover time moments\, essentially generalizing the Michaelis-Menten equation to moments of any order. We demonstrate how key observables such as the lifetime of the enzyme-substrate complex\, the rate of substrate-enzyme binding\, and the probability of successful product formation\, can all be inferred using these high-order Michaelis-Menten equations. We test our inference procedure to show that it is robust\, producing accurate results with only several thousand turnover events per substrate concentration.
URL:https://www.ibs.re.kr/bimag/event/high-order-michaelis-menten-equations-allow-inference-of-hidden-kinetic-parameters-in-enzyme-catalysis-hyeong-jun-jang/
LOCATION:B232 Seminar Room\, IBS\, 55 Expo-ro Yuseong-gu\, Daejeon\, Daejeon\, 34126\, Korea\, Republic of
CATEGORIES:Journal Club
ORGANIZER;CN="Jae Kyoung Kim":MAILTO:jaekkim@kaist.ac.kr
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Asia/Seoul:20260522T110000
DTEND;TZID=Asia/Seoul:20260522T120000
DTSTAMP:20260409T182456
CREATED:20260205T075139Z
LAST-MODIFIED:20260311T121645Z
UID:12194-1779447600-1779451200@www.ibs.re.kr
SUMMARY:Mathematics of diffusive signaling - Alan Lindsay
DESCRIPTION:Diffusive transport is one of the most fundamental mechanisms by which information\, mass\, and chemical signals propagate in physical and biological systems. In many settings—ranging from cellular signaling to chemical sensing—communication is mediated by particles undergoing random motion and interacting with small\, spatially localized targets. This talk explores the mathematical structures underlying diffusive signaling\, emphasizing how geometry\, stochasticity\, and multiscale effects shape signal detection and reliability. Using tools from stochastic processes\, partial differential equations\, and asymptotic analysis\, I will describe how seemingly microscopic features can exert a dominant influence on macroscopic signaling outcomes\, and highlight recent progress on quantifying signal strength\, timing\, and variability in complex geometries. \n  \nZoom : 997 8258 4700 (pw : 1234)
URL:https://www.ibs.re.kr/bimag/event/mathematics-of-diffusive-signaling-alan-lindsay/
LOCATION:B232 Seminar Room\, IBS\, 55 Expo-ro Yuseong-gu\, Daejeon\, Daejeon\, 34126\, Korea\, Republic of
CATEGORIES:Biomedical Mathematics Online Colloquium
ATTACH;FMTTYPE=image/jpeg:https://www.ibs.re.kr/bimag/cms/wp-content/uploads/2026/02/alan_lindsay-e1770278281837.jpg
ORGANIZER;CN="Jae Kyoung Kim":MAILTO:jaekkim@kaist.ac.kr
END:VEVENT
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